Publicações – Teixeira Lab

2023

Deep discovery informs difficult deployment in plant microbiome science

Russ, D., Fitzpatrick, C., Teixeira, P.J.P.L, Dangl, J.L.

Cell. 2023.

Microbiome-mediated metabolic defence

Thomazella, D.P., Teixeira, P.J.P.L

Nature Plants. 2023.

Plant-microbiome crosstalk and disease development

Pereira, L.B., Thomazella, D.P., Teixeira, P.J.P.L

Current Opinion in Plant Biology. 2023.

Endogenous salicylic acid suppresses de novo root regeneration from leaf explants

Tran, S., Ison, M., Ferreira Dias, N.C., Ortega, M.A., Chen, Y.F.S., Peper, A., Hu, L., Xu, D., Mozaffari, K., Severns, P.M., Yao, Y., Tsai, C., Teixeira, P.J.P.L., Yang, L.

PLoS Genetics. 2023.

2022

Infection by Moniliophthora perniciosa reprograms tomato Micro-Tom physiology, establishes a sink, and increases secondary cell wall synthesis

Paschoal, D., Costa, J.L., da Silva, E.M., da Silva, F.B., Capelin, D., Ometto, V., Aricetti, J.A., Carvalho, G.G., Pimpinato, R.F., de Oliveira, R.F., Carrera, E., López-Díaz, I., Rossi, M.L., Tornisielo, V., Caldana, C., Riano-Pachon, D.M., Cesarino, I., Teixeira, P.J.P.L., Figueira, A.

Journal of Experimental Botany. 2022.

2021

Specific modulation of the root immune system by a community of commensal bacteria

Teixeira, P.J.P.L, Colaianni, N.R., Law, T.F., Conway, J.M., Gilbert, S., Li, H., Salas-Gonzalez, I., Panda, D., Risco, N.M., Finkel, O.M., Castrillo, G., Mieczkowski, P., Jones, C.D., Dangl, J.L.

Proceedings of the National Academy of Sciences (PNAS). 2021.

Moniliophthora perniciosa, the causal agent of witches’ broom disease of cacao, interferes with cytokinin metabolism during infection of Micro‐Tom tomato and promotes symptom development

Costa, J. L., Paschoal, D., da Silva, E.M., Silva, J. S., do Carmo, R. M., Carrera, E., López-Díaz, I., Rossi, M.L., Freschi, L., Mieczkowski, P., Peres, L., Teixeira, P.J.L., Figueira, A.

New Phytologist. 2021.

2020

A single bacterial genus maintains root growth in a complex microbiome

Finkel, O.M., Salas-González, I., Castrillo, G., Conway, J.M., Law, T.F., Teixeira, P.J.P.L., Wilson, E.D., Fitzpatrick, C.R., Jones, C.D., Dangl, J.L.

Nature. 2020.

The Plant Microbiome: From Ecology to Reductionism and Beyond

Fitzpatrick, C.R., Salas-González, I., Conway, J.M., Finkel, O.M., Gilbert, S., Russ, D. Teixeira, P.J.P.L., Dangl, J.L.

Annual Review of Microbiology. 2020 Sep v.74.

MAMP-triggered Medium Alkalinization of Plant Cell Cultures

Fiorin, G.L., Sanchéz-Vallet, A., Thomma, B.P.H.J., Pereira, G.A.G., Teixeira, P.J.P.L.

Bio-protocol. 2020 10(08):e3588.

2019

The effects of soil phosphorus content on plant microbiota are driven by the plant phosphate starvation response

Finkel, O.M., Salas-González, I., Castrillo, G., Spaepen, S., Law, T.F., Teixeira, P.J.P.L., Jones, C.D. and Dangl, J.L.

PLoS biology. 2019 Nov 13;17(11).

Beyond pathogens: microbiota interactions with the plant immune system

Teixeira PJ, Colaianni NR, Fitzpatrick CR, Dangl JL.

Current Opinion in Microbiology. 2019 Jun 1;48:717.

2018

Suppression of Plant Immunity by Fungal Chitinase-like Effectors

Fiorin GL, Sanchéz-Vallet A, de Toledo Thomazella DP, do Prado PF, do Nascimento LC, de Oliveira Figueira AV, Thomma BP, Pereira GA, Teixeira PJ.

Current Biology. 2018 Sep 24;28(18):3023-30.

Root-exuded coumarin shapes the root microbiome

Lundberg DS, Teixeira PJ.

Proceedings of the National Academy of Sciences. 2018 May 29;115(22):5629-31.

Design of synthetic bacterial communities for predictable plant phenotypes

Paredes SH, Gao T, Law TF, Finkel OM, Mucyn T, Teixeira PJ, González IS, Feltcher ME, Powers MJ, Shank EA, Jones CD, Jovic V, Dangl JL, Castrillo G.

PLoS Biology. 2018 Feb 20;16(2):e2003962.

Ceratocystis cacaofunesta genome analysis reveals a large expansion of extracellular phosphatidylinositol-specific phospholipase-C genes (PI-PLC)

Molano EP, Cabrera OG, Jose J, do Nascimento LC, Carazzolle MF, Teixeira PJ, Alvarez JC, Tiburcio RA, Tokimatu Filho PM, de Lima GM, Guido RV, Correa TLR, Leme AFP, Mieczkowski P, Pereira GAG.

BMC Genomics. 2018 Jan;19(1):58.

2017

Plant pathogenesis–related proteins of the cacao fungal pathogen Moniliophthora perniciosa differ in their lipid-binding specificities

Darwiche R, El Atab O, Baroni RM, Teixeira PJ, Mondego JM, Pereira GA, Schneiter R.

Journal of Biological Chemistry. 2017 Dec 15;292(50):20558-69.

A gene encoding maize caffeoyl-CoA O-methyltransferase confers quantitative resistance to multiple pathogens

Yang Q, He Y, Kabahuma M, Chaya T, Kelly A, Borrego E, Bian Y, El Kasmi F, Yang L, Teixeira P, Kolkman J, Nelson R, Kolomiets M, Dangl J, Wisser R, Caplan J, Li X, Lauter N, Balint-Kurti P.

Nature Genetics. 2017 Sep;49(9):1364.

Tradict enables accurate prediction of eukaryotic transcriptional states from 100 marker genes

Biswas S, Kerner K, Teixeira PJ, Dangl JL, Jojic V, Wigge PA.

Nature Communications. 2017 May 5;8:15309.

Root microbiota drive direct integration of phosphate stress and immunity

Castrillo G*, Teixeira PJ*, Paredes SH*, Law TF, De Lorenzo L, Feltcher ME, Finkel OM, Breakfield NW, Mieczkowski P, Jones CD, Paz-Ares J, Dangl JL. *Equal contribution.

Nature. 2017 Mar;543(7646):513.

Pseudomonas syringae type III effector HopBB1 promotes host transcriptional repressor degradation to regulate phytohormone responses and virulence

Yang L*, Teixeira PJ*, Biswas S, Finkel OM, He Y, Salas-Gonzalez I, English ME, Epple P, Mieczkowski P, Dangl JL. *Equal contribution.

Cell Host & Microbe. 2017 Feb 8;21(2):156-68.

2016

Genome-wide assessment of efficiency and specificity in CRISPR/Cas9 mediated multiple site targeting in Arabidopsis

Peterson BA, Haak DC, Nishimura MT, Teixeira PJ, James SR, Dangl JL, Nimchuk ZL.

PloS ONE. 2016 Sep 13;11(9):e0162169.

Effector-triggered immune response in Arabidopsis thaliana is a quantitative trait

Iakovidis M, Teixeira PJ, Exposito-Alonso M, Cowper MG, Law TF, Liu Q, Vu MC, Dang TM, Corwin JA, Weigel D, Dangl JL.

Genetics. 2016 Sep 1;204(1):337-53.

Photosynthate regulation of the root system architecture mediated by the heterotrimeric G protein complex in Arabidopsis

Mudgil Y, Karve A, Teixeira PJ, Jiang K, Tunc-Ozdemir M, Jones AM.

Frontiers in Plant Science. 2016 Aug 25;7:1255.

De novo assembly of Candida sojae and Candida boidinii genomes, unexplored Xylose-consuming yeasts with potential for renewable biochemical production

Borelli G, José J, Teixeira PJ, Dos Santos LV, Pereira GA.

Genome Announc. 2016 Feb 25;4(1):e01551-15.

2015

Saccharomyces cerevisiae transcriptional reprograming due to bacterial contamination during industrial scale bioethanol production

Carvalho-Netto OV, Carazzolle MF, Mofatto LS, Teixeira PJ, Noronha MF, Calderón LA, Mieczkowski PA, Argueso JL, Pereira GA.

Microbial Cell Factories. 2015 Dec;14(1):13.

Genomic analyses and expression evaluation of thaumatin-like gene family in the cacao fungal pathogen Moniliophthora perniciosa

de Freitas Franco S, Baroni RM, Carazzolle MF, Teixeira PJ, Reis O, Pereira GA, Mondego JM.

Biochemical and Biophysical Research Communications. 2015 Oct 30;466(4):629-36.

Time for chocolate: current understanding and New perspectives on cacao Witches’ broom disease research

Teixeira PJ*, Thomazella DP*, Pereira GA. *Equal contribution

PLoS Pathogens. 2015 Oct 22;11(10):e1005130.

2014

High-resolution transcript profiling of the atypical biotrophic interaction between Theobroma cacao and the fungal pathogen Moniliophthora perniciosa.

Teixeira PJ*, Thomazella DP*, Reis O, do Prado PF, do Rio MC, Fiorin GL, José J, Costa GG, Negri VA, Mondego JM, Mieczkowski P, Pereira GA. *Equal contribution

The Plant Cell. 2014 Nov 1;26(11):4245-69.

Flavonoid supplementation affects the expression of genes involved in cell wall formation and lignification metabolism and increases sugar content and saccharification in the fast-growing eucalyptus hybrid E. urophylla x E. grandis

Lepikson-Neto J, Nascimento LC, Salazar MM, Camargo EL, Cairo JP, Teixeira PJ, Marques WL, Squina FM, Mieczkowski P, Deckmann AC, Pereira GA.

BMC Plant Biology. 2014 Nov;14(1):301.

Contrasting nitrogen fertilization treatments impact xylem gene expression and secondary cell wall lignification in Eucalyptus

Camargo EL, Nascimento LC, Soler M, Salazar MM, Lepikson-Neto J, Marques WL, Alves A, Teixeira PJ, Mieczkowski P, Carazzolle MF, Martinez Y, Deckmann AC, Rodrigues JC, Grima-Pettenati J, Pereira GA.

BMC Plant Biology. 2014 Sep;14(1):256.

Genome and secretome analysis of the hemibiotrophic fungal pathogen, Moniliophthora roreri, which causes frosty pod rot disease of cacao: mechanisms of the biotrophic and necrotrophic phases

Meinhardt LW, Costa GG, Thomazella DP, Teixeira PJ, Carazzolle MF, Schuster SC, Carlson JE, Guiltinan MJ, Mieczkowski P, Farmer A, Ramaraj T, Crozier J, Davis ER, Shao J, Melnick RL, Pereira GA, Bailey BA.

BMC Genomics. 2014 Feb;15(1):164.

2013

Xylem transcription profiles indicate potential metabolic responses for economically relevant characteristics of Eucalyptus species

Salazar MM, Nascimento LC, Camargo EL, Gonçalves DC, Neto JL, Marques WL, Teixeira PJ, Mieczkowski P, Mondego JM, Carazzolle MF, Deckmann AC, Pereira GA.

BMC Genomics. 2013 Mar;14(1):201.

Global analyses of Ceratocystis cacaofunesta mitochondria: from genome to proteome

Ambrosio AB, do Nascimento LC, Oliveira BV, Teixeira PJ, Tiburcio RA, Thomazella DP, Leme AF, Carazzolle MF, Vidal RO, Mieczkowski P, Meinhardt LW, Pereira GA, Cabrera, OG.

BMC Genomics. 2013 Feb;14(1):91.

Functional Diversification of Cerato-Platanins in Moniliophthora perniciosa as Seen by Differential Expression and Protein Function Specialization

de O. Barsottini MR, de Oliveira JF, Adamoski D, Teixeira PJ, do Prado PF, Tiezzi HO, Sforça ML, Cassago A, Portugal RV, de Oliveira PS, de M. Zeri AC, Dias, SM, Pereira, GA, Ambrosio, AL.

Molecular Plant-Microbe Interactions. 2013 Nov;26(11):1281-93.

Novel receptor‐like kinases in cacao contain PR‐1 extracellular domains

Teixeira PJ, Costa GG, Fiorin GL, Pereira GA, Mondego JM.

Molecular Plant Pathology. 2013 Aug;14(6):602-9.

2012

The genome sequence of Propionibacterium acidipropionici provides insights into its biotechnological and industrial potential

Parizzi LP, Grassi MC, Llerena LA, Carazzolle MF, Queiroz VL, Lunardi I, Zeidler AF, Teixeira PJ, Mieczkowski P, Rincones J, Pereira GA.

BMC Genomics. 2012 Oct;13(1):562.

A potential role for an extracellular methanol oxidase secreted by Moniliophthora perniciosa in Witches’ broom disease in cacao

de Oliveira BV, Teixeira GS, Reis O, Barau JG, Teixeira PJ, do Rio MC, Domingues RR, Meinhardt LW, Leme AF, Rincones J, Pereira GA.

Fungal Genetics and Biology. 2012 Nov 1;49(11):922-32.

The Fungal Pathogen Moniliophthora perniciosa Has Genes Similar to Plant PR-1 That Are Highly Expressed during Its Interaction with Cacao

Teixeira PJ*, Thomazella DP*, Vidal RO, Do Prado PF, Reis O, Baroni RM, Franco SF, Mieczkowski P, Pereira GA, Mondego JM. *Equal contribution.

PLoS One. 2012 Sep 20;7(9):e45929.

The hemibiotrophic cacao pathogen Moniliophthora perniciosa depends on a mitochondrial alternative oxidase for biotrophic development

Thomazella DP*, Teixeira PJ*, Oliveira HC, Saviani EE, Rincones J, Toni IM, Reis O, Garcia O, Meinhardt LW, Salgado I, Pereira GA. *Equal contribution.

New Phytologist. 2012 Jun 1;194(4):1025-34.

2011

The crystal structure of necrosis-and ethylene-inducing protein 2 from the causal agent of cacao’s Witches’ Broom disease reveals key elements for its activity

Zaparoli G, Barsottini MR, de Oliveira JF, Dyszy F, Teixeira PJ, Barau JG, Garcia O, Costa-Filho AJ, Ambrosio AL, Pereira GA, Dias SM.

Biochemistry. 2011 Oct 21;50(45):9901-10.